Batch Processing with Workflows

The batch workflow features of Terra provide support for computationally-intensive, long-running, and large-scale analysis.

You can perform whole pipelines—from preprocessing and trimming sequencing data to alignment and downstream analyses—using Terra workflows. Written in the human-readable Workflow Description Language (WDL), you can search for and import workflows into your workspace from Dockstore or the Broad Methods Repository.

Video: Data Analysis with Gen3, Terra and Dockstore​ Article: ​How to import data from Gen3 into Terra and run the TOPMed aligner workflow​ Article: ​Configure a workflow to process your data Article: ​​Getting workflows up and running faster with a JSON file Article: ​Importing a Dockstore workflow into Terra Video: Importing a Dockstore workflow into Terra walkthrough Video: Workflows Quickstart walkthrough Workspace: Workflows Quickstart workspace Workspace for BDC: TOPMed Aligner workspace Workspace for BDC: GWAS with 1000 Genomes and synthetic clinical data Workspace for BDC: GWAS with TOPMed data