How to get started with PIC-SURE and the common endpoints you can use to query any resource registered with PIC-SURE
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The PIC-SURE v2 API is a meta-API used to host any number of resources exposed through a unified set of generalized operations.
PIC-SURE Repositories:
: This is the repository for version 2+ of the PIC-SURE API.
: This is the wiki page for version 2+ of the PIC-SURE API.
: This is the repository for the BioData Catalyst environment of PIC-SURE.
: This is the repository for PIC-SURE-ALL-IN-ONE.
Additional PIC-SURE Links:
: A link to the Avillach Lab Jenkins repository.
: A repository for Avillach Lab Jenkins development release control.
The following are the collected client libraries for the entire PIC-SURE project.
The PIC-SURE User Interface acts as a visual aid for running normal queries of resources through PIC-SURE.
PIC-SURE User Interface Repositories:
Additional PIC-SURE User Interface Links:
The PSAMA component of the PIC-SURE ecosystem authorizes and authenticates all actions taken within PIC-SURE.
PSAMA Repos:
Additional PSAMA Links:
HPDS is a datastore designed to work with the PIC-SURE meta-API. It grants researchers fast, dependable access to static datasets and the ability to produce statistics-ready dataframes filtered on any variable they choose at any time.
HPDS Repositories:
: The main High Performance Data Store (HPDS) UI repository.
: Links to a google drawing of the PIC-SURE UI flow.
: This is where the core of the PSAMA application is stored in GitHub
: The main HPDS repository.
: Python client library to run queries against a PIC-SURE HPDS resource.
: R client library to run queries against a PIC-SURE HPDS resource.
: The main HPDS UI repository.
: This repository describes steps to prepare and annotate VCF files for loading into HPDS.